Xiling Shen Publications

Found 43 results
Type [ Year(Desc)]
Shen, X, JM Kahn, and MA Horowitz. "Compensation for multimode fiber dispersion by adaptive optics." Optics Letters 30, no. 22 (2005): 2985-2987.
Shen, X, JM Kahn, and MA Horowitz. "Compensation of multimode fiber dispersion using adaptive optics." In IET Conference Publications, 327-328. Vol. 2005., 2005.
Shen, X, J Collier, D Dill, L Shapiro, M Horowitz, and HH McAdams. "Architecture and inherent robustness of a bacterial cell-cycle control system." Proceedings of the National Academy of Sciences of USA 105, no. 32 (2008): 11340-11345.
Sikandar, S, D Dizon, X Shen, Z Li, J Besterman, and SM Lipkin. "The class I HDAC inhibitor MGCD0103 induces cell cycle arrest and apoptosis in colon cancer initiating cells by upregulating Dickkopf-1 and non-canonical Wnt signaling." Oncotarget 1, no. 7 (2010): 596-605.
Tan, MH, JB Kozdon, X Shen, L Shapiro, and HH McAdams. "An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation." Proceedings of the National Academy of Sciences of USA 107, no. 44 (2010): 18985-18990.
Shin, YJ, SM Lipkin, B Hencey, and X Shen. "Disturbance rejection helps modulate the P53 oscillation." ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011 2 (2011): 557-563.
Shin, Y-J, B Hencey, SM Lipkin, and X Shen. "Frequency domain analysis reveals external periodic fluctuations can generate sustained p53 oscillation." PloS one 6, no. 7 (2011).
Densmore, D, M Horowitz, S Krishnaswamy, X Shen, A Arkin, E Winfree, and C Voigt. "Joint DAC/IWBDA special session design and synthesis of biological circuits." Design Automation Conference (2011): 114-115.
Shin, Y-J, AH Sayed, and X Shen. "Adaptive models for gene networks." PloS one 7, no. 2 (2012).
Chen, HJ, R Edwards, S Tucci, P Bu, J Milsom, S Lee, W Edelmann, ZH Gümüş, X Shen, and S Lipkin. "Chemokine 25-induced signaling suppresses colon cancer invasion and metastasis." Journal of Clinical Investigation 122, no. 9 (2012): 3184-3196.
Shin, Y-J, AH Sayed, and X Shen. "Using an adaptive gene network model for self-organizing multicellular behavior." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings (2012): 5449-5453.
Bu, P, K-Y Chen, SM Lipkin, and X Shen. "Asymmetric division: a marker for cancer stem cells in early stage tumors?" Oncotarget 4, no. 7 (2013): 950-951.
Bu, P, K-Y Chen, JH Chen, L Wang, J Walters, YJ Shin, JP Goerger, J Sun, M Witherspoon, N Rakhilin, J Li, H Yang, J Milsom, S Lee, W Zipfel, MM Jin, ZH Gümüş, SM Lipkin, and X Shen. "A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells." Cell Stem Cell 12, no. 5 (2013): 602-615.
Shin, Y-J, K-Y Chen, AH Sayed, B Hencey, and X Shen. "Post-translational regulation enables robust p53 regulation." BMC Systems Biology 7 (2013).
Li, J, P Bu, K-Y Chen, and X Shen. "Spatial perturbation with synthetic protein scaffold reveals robustness of asymmetric cell division." Journal of Biomedical Science and Engineering 6, no. 2 (2013): 134-143.
Chen, K-Y, DJ Joe, JB Shealy, BR Land, and X Shen. "A bio-inspired spatial patterning circuit." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 2014 (2014): 86-89.
Chen, K-Y, X Liu, P Bu, C-S Lin, N Rakhilin, JW Locasale, and X Shen. "A metabolic signature of colon cancer initiating cells." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 2014 (2014): 4759-4762.
Cao, Y, N Rakhilin, X Shen, and EC Kan. "Nonamperometric CMOS sensing of intestinal action potentials." 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014 (2014): 2064-2066.
Chen, HJ, J Sun, Z Huang, H Hou, M Arcilla, N Rakhilin, DJ Joe, J Choi, P Gadamsetty, J Milsom, G Nandakumar, R Longman, XK Zhou, R Edwards, J Chen, KY Chen, P Bu, L Wang, Y Xu, R Munroe, C Abratte, AD Miller, ZH Gümüş, M Shuler, N Nishimura, W Edelmann, X Shen, and SM Lipkin. "Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting." Nature Biotechnology 33, no. 6 (2015): 656-660.
Johnson, C, MO Warmoes, X Shen, and JW Locasale. "Epigenetics and cancer metabolism." Cancer Letters 356, no. 2 Pt A (2015): 309-314.
Sun, S, G Shi, H Sha, Y Ji, X Han, X Shu, H Ma, T Inoue, B Gao, H Kim, P Bu, RD Guber, X Shen, A-H Lee, T Iwawaki, AW Paton, JC Paton, D Fang, B Tsai,, H Wu, S Kersten, Q Long, GE Duhamel, KW Simpson, and L Qi. "IRE1α is an endogenous substrate of endoplasmic-reticulum-associated degradation." Nature Cell Biology 17, no. 12 (2015): 1546-1555.
Bu, P, L Wang, K-Y Chen, N Rakhilin, J Sun, A Closa, K-L Tung, S King, Kristine A Varanko, Y Xu, Huan J Chen, AS Zessin, J Shealy, B Cummings, D Hsu, SM Lipkin, V Moreno, ZH Gümüş, and X Shen. "miR-1269 promotes metastasis and forms a positive feedback loop with TGF-β." Nature Communications 6 (2015).
Wang, L, P Bu, and X Shen. "Asymmetric division: An antitumor player?" Molecular & cellular oncology 3, no. 4 (2016).
Rothschild, DE, T Srinivasan, LA Aponte-Santiago, X Shen, and IC Allen. "The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids." Journal of Visualized Experiments, no. 111 (2016).
Wang, L, P Bu, Y Ai, T Srinivasan, HJ Chen, K Xiang, SM Lipkin, and X Shen. "A long non-coding RNA targets microRNA miR-34a to regulate colon cancer stem cell asymmetric division." eLife 5 (2016).