Xiling Shen Publications

Found 36 results
Type [ Year(Desc)]
2005
Shen, X, Kahn, JM, and Horowitz, MA. "Compensation for multimode fiber dispersion by adaptive optics." Optics Letters 30, no. 22 (2005): 2985-2987.
Shen, X, Kahn, JM, and Horowitz, MA. "Compensation of multimode fiber dispersion using adaptive optics." In IET Conference Publications, 327-328. Vol. 2005., 2005.
2008
Shen, X, Collier, J, Dill, D, Shapiro, L, Horowitz, M, and McAdams, HH. "Architecture and inherent robustness of a bacterial cell-cycle control system." Proceedings of the National Academy of Sciences of USA 105, no. 32 (2008): 11340-11345.
2010
Sikandar, S, Dizon, D, Shen, X, Li, Z, Besterman, J, and Lipkin, SM. "The class I HDAC inhibitor MGCD0103 induces cell cycle arrest and apoptosis in colon cancer initiating cells by upregulating Dickkopf-1 and non-canonical Wnt signaling." Oncotarget 1, no. 7 (2010): 596-605.
Tan, MH, Kozdon, JB, Shen, X, Shapiro, L, and McAdams, HH. "An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation." Proceedings of the National Academy of Sciences of USA 107, no. 44 (2010): 18985-18990.
2011
Shin, YJ, Lipkin, SM, Hencey, B, and Shen, X. "Disturbance rejection helps modulate the P53 oscillation." ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011 2 (2011): 557-563.
Shin, Y-J, Hencey, B, Lipkin, SM, and Shen, X. "Frequency domain analysis reveals external periodic fluctuations can generate sustained p53 oscillation." PloS one 6, no. 7 (2011).
Densmore, D, Horowitz, M, Krishnaswamy, S, Shen, X, Arkin, A, Winfree, E, and Voigt, C. "Joint DAC/IWBDA special session design and synthesis of biological circuits." Design Automation Conference (2011): 114-115.
2012
Shin, Y-J, Sayed, AH, and Shen, X. "Adaptive models for gene networks." PloS one 7, no. 2 (2012).
Chen, HJ, Edwards, R, Tucci, S, Bu, P, Milsom, J, Lee, S, Edelmann, W, Gümüş, ZH, Shen, X, and Lipkin, S. "Chemokine 25-induced signaling suppresses colon cancer invasion and metastasis." Journal of Clinical Investigation 122, no. 9 (2012): 3184-3196.
Shin, Y-J, Sayed, AH, and Shen, X. "Using an adaptive gene network model for self-organizing multicellular behavior." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings (2012): 5449-5453.
2013
Bu, P, Chen, K-Y, Lipkin, SM, and Shen, X. "Asymmetric division: a marker for cancer stem cells in early stage tumors?" Oncotarget 4, no. 7 (2013): 950-951.
Bu, P, Chen, K-Y, Chen, JH, Wang, L, Walters, J, Shin, YJ, Goerger, JP, Sun, J, Witherspoon, M, Rakhilin, N et al. "A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells." Cell Stem Cell 12, no. 5 (2013): 602-615.
Shin, Y-J, Chen, K-Y, Sayed, AH, Hencey, B, and Shen, X. "Post-translational regulation enables robust p53 regulation." BMC Systems Biology 7 (2013).
Li, J, Bu, P, Chen, K-Y, and Shen, X. "Spatial perturbation with synthetic protein scaffold reveals robustness of asymmetric cell division." Journal of Biomedical Science and Engineering 6, no. 2 (2013): 134-143.
2014
Chen, KY, Joe, DJ, Shealy, JB, Land, BR, and Shen, X. "A Bio-inspired spatial patterning circuit." 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014 (2014): 86-89.
Chen, K-Y, Liu, X, Bu, P, Lin, C-S, Rakhilin, N, Locasale, JW, and Shen, X. "A metabolic signature of colon cancer initiating cells." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 2014 (2014): 4759-4762.
Cao, Y, Rakhilin, N, Shen, X, and Kan, EC. "Nonamperometric CMOS sensing of intestinal action potentials." 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014 (2014): 2064-2066.
2015
Chen, HJ, Sun, J, Huang, Z, Hou, H, Arcilla, M, Rakhilin, N, Joe, DJ, Choi, J, Gadamsetty, P, Milsom, J et al. "Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting." Nature Biotechnology 33, no. 6 (2015): 656-660.
Johnson, C, Warmoes, MO, Shen, X, and Locasale, JW. "Epigenetics and cancer metabolism." Cancer Letters 356, no. 2 Pt A (2015): 309-314.
Sun, S, Shi, G, Sha, H, Ji, Y, Han, X, Shu, X, Ma, H, Inoue, T, Gao, B, Kim, H et al. "IRE1α is an endogenous substrate of endoplasmic-reticulum-associated degradation." Nature Cell Biology 17, no. 12 (2015): 1546-1555.
Bu, P, Wang, L, Chen, K-Y, Rakhilin, N, Sun, J, Closa, A, Tung, K-L, King, S, A Varanko, Kristine, Xu, Y et al. "miR-1269 promotes metastasis and forms a positive feedback loop with TGF-β." Nature Communications 6 (2015).
2016
Wang, L, Bu, P, and Shen, X. "Asymmetric division: An antitumor player?" Molecular & cellular oncology 3, no. 4 (2016).
Rothschild, DE, Srinivasan, T, Aponte-Santiago, LA, Shen, X, and Allen, IC. "The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids." Journal of Visualized Experiments, no. 111 (2016).
Wang, L, Bu, P, Ai, Y, Srinivasan, T, Chen, HJ, Xiang, K, Lipkin, SM, and Shen, X. "A long non-coding RNA targets microRNA miR-34a to regulate colon cancer stem cell asymmetric division." eLife 5 (2016).

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