Xiling Shen Publications

Found 36 results
[ Type(Desc)] Year
Conference Paper
Shen, X, Kahn, JM, and Horowitz, MA. "Compensation of multimode fiber dispersion using adaptive optics." In IET Conference Publications, 327-328. Vol. 2005., 2005.
Journal Article
Shin, Y-J, Sayed, AH, and Shen, X. "Adaptive models for gene networks." PloS one 7, no. 2 (2012).
Kulkarni, S, Micci, M-A, Leser, J, Shin, C, Tang, S-C, Fu, Y-Y, Liu, L, Li, Q, Saha, M, Li, C et al. "Adult enteric nervous system in health is maintained by a dynamic balance between neuronal apoptosis and neurogenesis." Proceedings of the National Academy of Sciences of USA 114, no. 18 (2017): E3709-E3718.
Shen, X, Collier, J, Dill, D, Shapiro, L, Horowitz, M, and McAdams, HH. "Architecture and inherent robustness of a bacterial cell-cycle control system." Proceedings of the National Academy of Sciences of USA 105, no. 32 (2008): 11340-11345.
Bu, P, Chen, K-Y, Lipkin, SM, and Shen, X. "Asymmetric division: a marker for cancer stem cells in early stage tumors?" Oncotarget 4, no. 7 (2013): 950-951.
Wang, L, Bu, P, and Shen, X. "Asymmetric division: An antitumor player?" Molecular & cellular oncology 3, no. 4 (2016).
Chen, KY, Joe, DJ, Shealy, JB, Land, BR, and Shen, X. "A Bio-inspired spatial patterning circuit." 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014 (2014): 86-89.
Chen, HJ, Edwards, R, Tucci, S, Bu, P, Milsom, J, Lee, S, Edelmann, W, Gümüş, ZH, Shen, X, and Lipkin, S. "Chemokine 25-induced signaling suppresses colon cancer invasion and metastasis." Journal of Clinical Investigation 122, no. 9 (2012): 3184-3196.
Sikandar, S, Dizon, D, Shen, X, Li, Z, Besterman, J, and Lipkin, SM. "The class I HDAC inhibitor MGCD0103 induces cell cycle arrest and apoptosis in colon cancer initiating cells by upregulating Dickkopf-1 and non-canonical Wnt signaling." Oncotarget 1, no. 7 (2010): 596-605.
Shen, X, Kahn, JM, and Horowitz, MA. "Compensation for multimode fiber dispersion by adaptive optics." Optics Letters 30, no. 22 (2005): 2985-2987.
Chen, HJ, Sun, J, Huang, Z, Hou, H, Arcilla, M, Rakhilin, N, Joe, DJ, Choi, J, Gadamsetty, P, Milsom, J et al. "Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting." Nature Biotechnology 33, no. 6 (2015): 656-660.
Shin, YJ, Lipkin, SM, Hencey, B, and Shen, X. "Disturbance rejection helps modulate the P53 oscillation." ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011 2 (2011): 557-563.
Johnson, C, Warmoes, MO, Shen, X, and Locasale, JW. "Epigenetics and cancer metabolism." Cancer Letters 356, no. 2 Pt A (2015): 309-314.
Tan, MH, Kozdon, JB, Shen, X, Shapiro, L, and McAdams, HH. "An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation." Proceedings of the National Academy of Sciences of USA 107, no. 44 (2010): 18985-18990.
Rothschild, DE, Srinivasan, T, Aponte-Santiago, LA, Shen, X, and Allen, IC. "The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids." Journal of Visualized Experiments, no. 111 (2016).
Shin, Y-J, Hencey, B, Lipkin, SM, and Shen, X. "Frequency domain analysis reveals external periodic fluctuations can generate sustained p53 oscillation." PloS one 6, no. 7 (2011).
Wang, Y, Huang, D, Chen, K-Y, Cui, M, Wang, W, Huang, X, Awadellah, A, Li, Q, Friedman, A, Xin, WW et al. "Fucosylation Deficiency in Mice Leads to Colitis and Adenocarcinoma." Gastroenterology 152, no. 1 (2017): 193-205.e10.
Sun, S, Shi, G, Sha, H, Ji, Y, Han, X, Shu, X, Ma, H, Inoue, T, Gao, B, Kim, H et al. "IRE1α is an endogenous substrate of endoplasmic-reticulum-associated degradation." Nature Cell Biology 17, no. 12 (2015): 1546-1555.
Densmore, D, Horowitz, M, Krishnaswamy, S, Shen, X, Arkin, A, Winfree, E, and Voigt, C. "Joint DAC/IWBDA special session design and synthesis of biological circuits." Design Automation Conference (2011): 114-115.
Wang, L, Bu, P, Ai, Y, Srinivasan, T, Chen, HJ, Xiang, K, Lipkin, SM, and Shen, X. "A long non-coding RNA targets microRNA miR-34a to regulate colon cancer stem cell asymmetric division." eLife 5 (2016).
Chen, K-Y, Liu, X, Bu, P, Lin, C-S, Rakhilin, N, Locasale, JW, and Shen, X. "A metabolic signature of colon cancer initiating cells." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 2014 (2014): 4759-4762.
Bu, P, Chen, K-Y, Chen, JH, Wang, L, Walters, J, Shin, YJ, Goerger, JP, Sun, J, Witherspoon, M, Rakhilin, N et al. "A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells." Cell Stem Cell 12, no. 5 (2013): 602-615.
Bu, P, Wang, L, Chen, K-Y, Rakhilin, N, Sun, J, Closa, A, Tung, K-L, King, S, A Varanko, Kristine, Xu, Y et al. "miR-1269 promotes metastasis and forms a positive feedback loop with TGF-β." Nature Communications 6 (2015).
Bu, P, Wang, L, Chen, K-Y, Srinivasan, T, Murthy, PKL, Tung, K-L, Varanko, AK, Chen, HJ, Ai, Y, King, S et al. "A miR-34a-Numb Feedforward Loop Triggered by Inflammation Regulates Asymmetric Stem Cell Division in Intestine and Colon Cancer." Cell Stem Cell 18, no. 2 (2016): 189-202.
Cao, Y, Rakhilin, N, Shen, X, and Kan, EC. "Nonamperometric CMOS sensing of intestinal action potentials." 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014 (2014): 2064-2066.