Xiling Shen Publications

Found 38 results
[ Type(Desc)] Year
Conference Paper
X Shen, JM Kahn, and MA Horowitz. "Compensation of multimode fiber dispersion using adaptive optics." In IET Conference Publications, 327-328. Vol. 2005. 2005.
Journal Article
Y-J Shin, AH Sayed, and X Shen. "Adaptive models for gene networks." PloS one 7, no. 2 (2012).
S Kulkarni, M-A Micci, J Leser, C Shin, S-C Tang, Y-Y Fu, L Liu, Q Li, M Saha, C Li et al. "Adult enteric nervous system in health is maintained by a dynamic balance between neuronal apoptosis and neurogenesis." Proceedings of the National Academy of Sciences of USA 114, no. 18 (2017): E3709-E3718.
X Shen, J Collier, D Dill, L Shapiro, M Horowitz, and HH McAdams. "Architecture and inherent robustness of a bacterial cell-cycle control system." Proceedings of the National Academy of Sciences of USA 105, no. 32 (2008): 11340-11345.
P Bu, K-Y Chen, SM Lipkin, and X Shen. "Asymmetric division: a marker for cancer stem cells in early stage tumors?" Oncotarget 4, no. 7 (2013): 950-951.
L Wang, P Bu, and X Shen. "Asymmetric division: An antitumor player?" Molecular & cellular oncology 3, no. 4 (2016).
KY Chen, DJ Joe, JB Shealy, BR Land, and X Shen. "A Bio-inspired spatial patterning circuit." 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014 (2014): 86-89.
HJ Chen, R Edwards, S Tucci, P Bu, J Milsom, S Lee, W Edelmann, ZH Gümüş, X Shen, and S Lipkin. "Chemokine 25-induced signaling suppresses colon cancer invasion and metastasis." Journal of Clinical Investigation 122, no. 9 (2012): 3184-3196.
S Sikandar, D Dizon, X Shen, Z Li, J Besterman, and SM Lipkin. "The class I HDAC inhibitor MGCD0103 induces cell cycle arrest and apoptosis in colon cancer initiating cells by upregulating Dickkopf-1 and non-canonical Wnt signaling." Oncotarget 1, no. 7 (2010): 596-605.
X Shen, JM Kahn, and MA Horowitz. "Compensation for multimode fiber dispersion by adaptive optics." Optics Letters 30, no. 22 (2005): 2985-2987.
HJ Chen, J Sun, Z Huang, H Hou, M Arcilla, N Rakhilin, DJ Joe, J Choi, P Gadamsetty, J Milsom et al. "Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting." Nature Biotechnology 33, no. 6 (2015): 656-660.
YJ Shin, SM Lipkin, B Hencey, and X Shen. "Disturbance rejection helps modulate the P53 oscillation." ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011 2 (2011): 557-563.
BB Barth, CS Henriquez, WM Grill, and X Shen. "Electrical stimulation of gut motility guided by an in silico model." Journal of Neural Engineering (2017).
C Johnson, MO Warmoes, X Shen, and JW Locasale. "Epigenetics and cancer metabolism." Cancer Letters 356, no. 2 Pt A (2015): 309-314.
MH Tan, JB Kozdon, X Shen, L Shapiro, and HH McAdams. "An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation." Proceedings of the National Academy of Sciences of USA 107, no. 44 (2010): 18985-18990.
DE Rothschild, T Srinivasan, LA Aponte-Santiago, X Shen, and IC Allen. "The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids." Journal of Visualized Experiments, no. 111 (2016).
Y-J Shin, B Hencey, SM Lipkin, and X Shen. "Frequency domain analysis reveals external periodic fluctuations can generate sustained p53 oscillation." PloS one 6, no. 7 (2011).
Y Wang, D Huang, K-Y Chen, M Cui, W Wang, X Huang, A Awadellah, Q Li, A Friedman, WW Xin et al. "Fucosylation Deficiency in Mice Leads to Colitis and Adenocarcinoma." Gastroenterology 152, no. 1 (2017): 193-205.e10.
S Sun, G Shi, H Sha, Y Ji, X Han, X Shu, H Ma, T Inoue, B Gao, H Kim et al. "IRE1α is an endogenous substrate of endoplasmic-reticulum-associated degradation." Nature Cell Biology 17, no. 12 (2015): 1546-1555.
D Densmore, M Horowitz, S Krishnaswamy, X Shen, A Arkin, E Winfree, and C Voigt. "Joint DAC/IWBDA special session design and synthesis of biological circuits." Design Automation Conference (2011): 114-115.
L Wang, P Bu, Y Ai, T Srinivasan, HJ Chen, K Xiang, SM Lipkin, and X Shen. "A long non-coding RNA targets microRNA miR-34a to regulate colon cancer stem cell asymmetric division." eLife 5 (2016).
K-Y Chen, X Liu, P Bu, C-S Lin, N Rakhilin, JW Locasale, and X Shen. "A metabolic signature of colon cancer initiating cells." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 2014 (2014): 4759-4762.
P Bu, K-Y Chen, JH Chen, L Wang, J Walters, YJ Shin, JP Goerger, J Sun, M Witherspoon, N Rakhilin et al. "A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells." Cell Stem Cell 12, no. 5 (2013): 602-615.
P Bu, L Wang, K-Y Chen, N Rakhilin, J Sun, A Closa, K-L Tung, S King, Kristine A Varanko, Y Xu et al. "miR-1269 promotes metastasis and forms a positive feedback loop with TGF-β." Nature Communications 6 (2015).
P Bu, L Wang, K-Y Chen, T Srinivasan, PKL Murthy, K-L Tung, AK Varanko, HJ Chen, Y Ai, S King et al. "A miR-34a-Numb Feedforward Loop Triggered by Inflammation Regulates Asymmetric Stem Cell Division in Intestine and Colon Cancer." Cell Stem Cell 18, no. 2 (2016): 189-202.

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