Xiling Shen Publications

Found 38 results
[ Type(Desc)] Year
Conference Paper
Shen, X, Kahn, JM, and Horowitz, MA. "Compensation of multimode fiber dispersion using adaptive optics." In IET Conference Publications, 327-328. Vol. 2005., 2005.
Journal Article
Shin, Y-J, Sayed, AH, and Shen, X. "Adaptive models for gene networks." PloS one 7, no. 2 (2012).
Kulkarni, S, Micci, M-A, Leser, J, Shin, C, Tang, S-C, Fu, Y-Y, Liu, L, Li, Q, Saha, M, Li, C et al. "Adult enteric nervous system in health is maintained by a dynamic balance between neuronal apoptosis and neurogenesis." Proceedings of the National Academy of Sciences of USA 114, no. 18 (2017): E3709-E3718.
Shen, X, Collier, J, Dill, D, Shapiro, L, Horowitz, M, and McAdams, HH. "Architecture and inherent robustness of a bacterial cell-cycle control system." Proceedings of the National Academy of Sciences of USA 105, no. 32 (2008): 11340-11345.
Bu, P, Chen, K-Y, Lipkin, SM, and Shen, X. "Asymmetric division: a marker for cancer stem cells in early stage tumors?" Oncotarget 4, no. 7 (2013): 950-951.
Wang, L, Bu, P, and Shen, X. "Asymmetric division: An antitumor player?" Molecular & cellular oncology 3, no. 4 (2016).
Chen, KY, Joe, DJ, Shealy, JB, Land, BR, and Shen, X. "A Bio-inspired spatial patterning circuit." 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014 (2014): 86-89.
Chen, HJ, Edwards, R, Tucci, S, Bu, P, Milsom, J, Lee, S, Edelmann, W, Gümüş, ZH, Shen, X, and Lipkin, S. "Chemokine 25-induced signaling suppresses colon cancer invasion and metastasis." Journal of Clinical Investigation 122, no. 9 (2012): 3184-3196.
Sikandar, S, Dizon, D, Shen, X, Li, Z, Besterman, J, and Lipkin, SM. "The class I HDAC inhibitor MGCD0103 induces cell cycle arrest and apoptosis in colon cancer initiating cells by upregulating Dickkopf-1 and non-canonical Wnt signaling." Oncotarget 1, no. 7 (2010): 596-605.
Shen, X, Kahn, JM, and Horowitz, MA. "Compensation for multimode fiber dispersion by adaptive optics." Optics Letters 30, no. 22 (2005): 2985-2987.
Chen, HJ, Sun, J, Huang, Z, Hou, H, Arcilla, M, Rakhilin, N, Joe, DJ, Choi, J, Gadamsetty, P, Milsom, J et al. "Comprehensive models of human primary and metastatic colorectal tumors in immunodeficient and immunocompetent mice by chemokine targeting." Nature Biotechnology 33, no. 6 (2015): 656-660.
Shin, YJ, Lipkin, SM, Hencey, B, and Shen, X. "Disturbance rejection helps modulate the P53 oscillation." ASME 2011 Dynamic Systems and Control Conference and Bath/ASME Symposium on Fluid Power and Motion Control, DSCC 2011 2 (2011): 557-563.
Barth, BB, Henriquez, CS, Grill, WM, and Shen, X. "Electrical stimulation of gut motility guided by an in silico model." Journal of Neural Engineering (2017).
Johnson, C, Warmoes, MO, Shen, X, and Locasale, JW. "Epigenetics and cancer metabolism." Cancer Letters 356, no. 2 Pt A (2015): 309-314.
Tan, MH, Kozdon, JB, Shen, X, Shapiro, L, and McAdams, HH. "An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation." Proceedings of the National Academy of Sciences of USA 107, no. 44 (2010): 18985-18990.
Rothschild, DE, Srinivasan, T, Aponte-Santiago, LA, Shen, X, and Allen, IC. "The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids." Journal of Visualized Experiments, no. 111 (2016).
Shin, Y-J, Hencey, B, Lipkin, SM, and Shen, X. "Frequency domain analysis reveals external periodic fluctuations can generate sustained p53 oscillation." PloS one 6, no. 7 (2011).
Wang, Y, Huang, D, Chen, K-Y, Cui, M, Wang, W, Huang, X, Awadellah, A, Li, Q, Friedman, A, Xin, WW et al. "Fucosylation Deficiency in Mice Leads to Colitis and Adenocarcinoma." Gastroenterology 152, no. 1 (2017): 193-205.e10.
Sun, S, Shi, G, Sha, H, Ji, Y, Han, X, Shu, X, Ma, H, Inoue, T, Gao, B, Kim, H et al. "IRE1α is an endogenous substrate of endoplasmic-reticulum-associated degradation." Nature Cell Biology 17, no. 12 (2015): 1546-1555.
Densmore, D, Horowitz, M, Krishnaswamy, S, Shen, X, Arkin, A, Winfree, E, and Voigt, C. "Joint DAC/IWBDA special session design and synthesis of biological circuits." Design Automation Conference (2011): 114-115.
Wang, L, Bu, P, Ai, Y, Srinivasan, T, Chen, HJ, Xiang, K, Lipkin, SM, and Shen, X. "A long non-coding RNA targets microRNA miR-34a to regulate colon cancer stem cell asymmetric division." eLife 5 (2016).
Chen, K-Y, Liu, X, Bu, P, Lin, C-S, Rakhilin, N, Locasale, JW, and Shen, X. "A metabolic signature of colon cancer initiating cells." Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings 2014 (2014): 4759-4762.
Bu, P, Chen, K-Y, Chen, JH, Wang, L, Walters, J, Shin, YJ, Goerger, JP, Sun, J, Witherspoon, M, Rakhilin, N et al. "A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells." Cell Stem Cell 12, no. 5 (2013): 602-615.
Bu, P, Wang, L, Chen, K-Y, Rakhilin, N, Sun, J, Closa, A, Tung, K-L, King, S, A Varanko, Kristine, Xu, Y et al. "miR-1269 promotes metastasis and forms a positive feedback loop with TGF-β." Nature Communications 6 (2015).
Bu, P, Wang, L, Chen, K-Y, Srinivasan, T, Murthy, PKL, Tung, K-L, Varanko, AK, Chen, HJ, Ai, Y, King, S et al. "A miR-34a-Numb Feedforward Loop Triggered by Inflammation Regulates Asymmetric Stem Cell Division in Intestine and Colon Cancer." Cell Stem Cell 18, no. 2 (2016): 189-202.